A Computational Model for the Analysis of Lipoprotein Distributions in the Mouse: Translating FPLC Profiles to Lipoprotein Metabolism
نویسندگان
چکیده
Disturbances of lipoprotein metabolism are recognized as indicators of cardiometabolic disease risk. Lipoprotein size and composition, measured in a lipoprotein profile, are considered to be disease risk markers. However, the measured profile is a collective result of complex metabolic interactions, which complicates the identification of changes in metabolism. In this study we aim to develop a method which quantitatively relates murine lipoprotein size, composition and concentration to the molecular mechanisms underlying lipoprotein metabolism. We introduce a computational framework which incorporates a novel kinetic model of murine lipoprotein metabolism. The model is applied to compute a distribution of plasma lipoproteins, which is then related to experimental lipoprotein profiles through the generation of an in silico lipoprotein profile. The model was first applied to profiles obtained from wild-type C57Bl/6J mice. The results provided insight into the interplay of lipoprotein production, remodelling and catabolism. Moreover, the concentration and metabolism of unmeasured lipoprotein components could be determined. The model was validated through the prediction of lipoprotein profiles of several transgenic mouse models commonly used in cardiovascular research. Finally, the framework was employed for longitudinal analysis of the profiles of C57Bl/6J mice following a pharmaceutical intervention with a liver X receptor (LXR) agonist. The multifaceted regulatory response to the administration of the compound is incompletely understood. The results explain the characteristic changes of the observed lipoprotein profile in terms of the underlying metabolic perturbation and resultant modifications of lipid fluxes in the body. The Murine Lipoprotein Profiler (MuLiP) presented here is thus a valuable tool to assess the metabolic origin of altered murine lipoprotein profiles and can be applied in preclinical research performed in mice for analysis of lipid fluxes and lipoprotein composition.
منابع مشابه
Supporting information – Text S8: Supplemental analyses of the LXR model A computational model for the analysis of lipoprotein distributions in the mouse: Translating FPLC profiles to lipoprotein metabolism
A computational model for the analysis of lipoprotein distributions in the mouse: Translating FPLC profiles to lipoprotein metabolism
متن کاملSupporting information – Text S4: Wild-type model parametrisation A computational model for the analysis of lipoprotein distributions in the mouse: Translating FPLC profiles to lipoprotein metabolism
Where x are the state variables of the model, i.e. the lipoprotein concentrations in each cell of both grids ( mol / kg), t represents time (hours), are the model parameters, and u are the model inputs of VLDL and HDL production, which are not time dependent but do depend on several model parameters (D, A scale ). The initial conditions, 0 x are defined at t = 0, 0 0 = ) , ( x t x . The mo...
متن کاملSupporting information – Text S1: Additional calculations A computational model for the analysis of lipoprotein distributions in the mouse: Translating FPLC profiles to lipoprotein metabolism
In this section, we provide the derivation of equation (3) (Main text). The objective of this calculation is to find an equation that defines CE(j). The equation should provide a value of # CE that is independent of i and that leads to a linear increase in the log10(D) in the progression from (imin; jmin) to (imin; jmax). We note that for all other values of i, the increase in log10(D) will the...
متن کاملSupporting information – Text S2: Wild-type model equations A computational model for the analysis of lipoprotein distributions in the mouse: Translating FPLC profiles to lipoprotein metabolism
Model structure and boundaries The sub-models are divided into 8 by 40 and 40 by 8 compartments of lipoprotein composition, which throughout the supplemental material will be referred to as cells. The metabolism of lipoproteins in cell (i ,j) can be described by equation (1) for cells in the HDL grid and by equation (2) if the cell is in the VLDL grid (see equations (9) and (11) in the Main Tex...
متن کاملSupporting information – Text S5: Wild-type model analysis A computational model for the analysis of lipoprotein distributions in the mouse: Translating FPLC profiles to lipoprotein metabolism
A computational model for the analysis of lipoprotein distributions in the mouse: Translating FPLC profiles to lipoprotein metabolism Following parameter estimation and evaluation, two parameter sets were found to describe the data well (these will be referred to as sets X1 and X2). Inspection of the in silico FPLC profiles (e.g. Figure 1 in Text S4) reveals that in the VLDL and LDL size range,...
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عنوان ژورنال:
دوره 10 شماره
صفحات -
تاریخ انتشار 2014